I presume you are working on a TRX400EX?
Are your bolts hex, phillips or allen head? I am going to guess they are hex head.
Generally if they are hex head, the cause of the problem is the socket being used to take them out - get a new socket and most of the time the problem is solved - then put it back together with new bolts.
In any case, the last resort (but efficient) is to use a 1/4" drill bit and drill the head off the bolt - then the filter cover can be removed exposing the shank of the bolt. If the bolt has not been over-tightened or otherwise locked into the threaded hole, the bolt will usually spin out with fingers - if the bolt it tight in the threads, at least there is enough shank sticking out to get pliers or vice grips on. If it is really screwed up (rusted or locktight'ed in the hole), it will require an experienced mechanic to extract and rethread the holes.
Are your bolts hex, phillips or allen head? I am going to guess they are hex head.
Generally if they are hex head, the cause of the problem is the socket being used to take them out - get a new socket and most of the time the problem is solved - then put it back together with new bolts.
In any case, the last resort (but efficient) is to use a 1/4" drill bit and drill the head off the bolt - then the filter cover can be removed exposing the shank of the bolt. If the bolt has not been over-tightened or otherwise locked into the threaded hole, the bolt will usually spin out with fingers - if the bolt it tight in the threads, at least there is enough shank sticking out to get pliers or vice grips on. If it is really screwed up (rusted or locktight'ed in the hole), it will require an experienced mechanic to extract and rethread the holes.